Attendance for today's session: Cade, Julie, Alex M, Mitchell, Scott. 

Tasks worked on:

• Continue to fix continuity of loop: Cade and Julie worked on fixing the following errors:
  1. In section D of the loop, it currently
     • Moves the output from the python conversion to $AraSimExec directory. 
     • Renames it as a .txt file (note the $i is renaming each in line with $NPOP). 

for i in `seq 1 $NPOP`

do

      mv evol_antenna_model_$i.dat $AraSimExec

done

for i in `seq 1 $NPOP`

do

      cp evol_antenna_model_$i.dat a_$i.txt

done

However, this wasn't working and it was only properly renaming individual 1. To check this,

• We confirmed it is properly iterating the first loop by using the "echo" command. The second loop was not properly iterating, however.
• We were able to fix it by combining these steps. This was confirmed to have worked. 

for i in `seq 1 $NPOP`

do

      mv evol_antenna_model_$i.dat $AraSimExec/a_$i.txt

done

              2. We got this iteration $i to work in the job script -- ie as an input file variable. The loop now successfully submits AraSim as a job with the proper input files. 

• Clean bash script
  • Mitchell and Alex M worked again today on turning every function possible into functions (and putting them in their own .sh scripts that are being called by XF_Loop.sh). 
    • The loop runs the first generation "manually" -- ie each step was spelled out, and nothing is put into a loop. The second+ generations then run as a loop. This is because we need to initialize the first XF run -- which then has no problems in the later iterations.
      • Alex M. and Mitchell are now turning each section A-F into individual functions and put into their own .sh scripts. Thus section A would just be calling another .sh script. In gen 2+ we then loop over these SectionA.sh through SectionF.sh functions. All of these just got completed. He just needs to add the change Julie and Cade made today, and clean some things up. 
        • For example, he has an "if else" statement that tells it whether or not it's the first (XF initializes) generation, or in generation 2+. Cade has a few changes he would like Alex to make to clean up this part of the run. 
    • Idea: The loop used to run the first generation "manually" -- ie each step was spelled out, and nothing was put into a loop. The second+ generations then ran as a loop. Since we were able to get XF to import the xmacro scripts automatically -- as well as save the project with the correct name (matching the expected name initialize in the bash script)-- they've gotten rid of that first "manual" iteration, and are now fully running all generations as a loop. We haven't tested whether or not we can make this change yet, but it is worth looking into now that some changes have been successfully made with XF. 

Quick note from Julie:

I tried to run from the terminal once Cade left. I get the following output/error that we should make sure isn't happening for other users (since most of this is a permissions issue that I thought we fixed. I can look into the other errors and see if anyone else gets them). For whatever reason, Cade is not having the same output errors; he is able to run the same copy just fine. 

Roulette algorithm initialized.

./XF_Loop.sh: line 136: output.xmacro: Permission denied

./XF_Loop.sh: line 137: output.xmacro: Permission denied

./XF_Loop.sh: line 138: output.xmacro: Permission denied

./XF_Loop.sh: line 139: output.xmacro: Permission denied

./XF_Loop.sh: line 140: output.xmacro: Permission denied

./XF_Loop.sh: line 146: simulation_PEC.xmacro: Permission denied

./XF_Loop.sh: line 147: simulation_PEC.xmacro: Permission denied

./XF_Loop.sh: line 149: simulation_PEC.xmacro: Permission denied

./XF_Loop.sh: line 158: simulation_PEC.xmacro: Permission denied

 

Opening XF user interface...

*** Please remember to save the project with the same name as RunName! ***

 

1. Import and run simulation_PEC.xmacro

2. Import and run output.xmacro

3. Close XF

Lmod has detected the following error:  The following module(s) are unknown: "xfdtd"

 

Please check the spelling or version number. Also try "module spider ..."

It is also possible your cache file is out-of-date; it may help to try:

  $ module --ignore-cache load "xfdtd"

Also make sure that all modulefiles written in TCL start with the string #%Module

./XF_Loop.sh: line 172: xfdtd: command not found

./XF_Loop.sh: line 177: cd: /fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Run_Outputs/Julie/Julie.xf/Simulations/000001/Run0001/: No such file or directory

./XF_Loop.sh: line 178: xfsolver: command not found

./XF_Loop.sh: line 177: cd: /fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Run_Outputs/Julie/Julie.xf/Simulations/000002/Run0001/: No such file or directory

./XF_Loop.sh: line 178: xfsolver: command not found

./XF_Loop.sh: line 183: xfdtd: command not found

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/AraSimTestJob.sh’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Antenna_Performance_Metric/AraOut_%num%.txt’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/XF_Loop3.sh’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/#Part_C.sh#’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/#Part_A.sh#’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957233’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957230’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957234’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957224’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957220’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957220’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957234’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957227’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957233’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957218’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957224’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957231’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957226’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957221’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957223’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957217’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957227’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957218’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957223’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957225’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957230’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957225’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957222’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957231’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957217’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957222’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957226’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957221’: Operation not permitted

 

Resuming...

 

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/AraSimTestJob.sh’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Antenna_Performance_Metric/AraOut_%num%.txt’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/XF_Loop3.sh’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/#Part_C.sh#’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/#Part_A.sh#’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957233’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957230’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957234’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957224’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957220’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957220’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957234’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957227’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957233’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957218’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957224’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957231’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957226’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957221’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957223’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957217’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957227’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957218’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957223’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957225’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957230’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957225’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957222’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957231’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957217’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957222’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957226’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957221’: Operation not permitted

Resuming...

NOTE:  You may want to change the following in your job for Owens

 

    nodes=1:ppn=1 defaulting to mem=4571MB

 

Please review the Owens documentation:

    https://www.osc.edu/supercomputing/computing/owens

 

Feel free to contact oschelp@osc.edu if you have any questions.

 

8485416.owens-batch.ten.osc.edu

rm: cannot remove ‘outputs/*.root’: No such file or directory

NOTE:  You may want to change the following in your job for Owens

 

    nodes=1:ppn=1 defaulting to mem=4571MB

 

Please review the Owens documentation:

    https://www.osc.edu/supercomputing/computing/owens

 

Feel free to contact oschelp@osc.edu if you have any questions.

 

8485417.owens-batch.ten.osc.edu

rm: cannot remove ‘outputs/*.root’: No such file or directory

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/AraSimTestJob.sh’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Antenna_Performance_Metric/AraOut_%num%.txt’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/XF_Loop3.sh’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/#Part_C.sh#’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Loop_Functions/#Part_A.sh#’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957233’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957230’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957234’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957224’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957220’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957220’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957234’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957227’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957233’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957218’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957224’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957231’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957226’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957221’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957223’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957217’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957227’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957218’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957223’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957225’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957230’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957225’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957222’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957231’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957217’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957222’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.o957226’: Operation not permitted

chmod: changing permissions of ‘/fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/scriptEOFiles/AraSimCall.sh.e957221’: Operation not permitted

mv: cannot stat ‘*.root’: No such file or directory

Fitness function initialized.

0 

Data successfully read. Data successfully written.