At the main GENETIS meeting yesterday, we collected the last few things that need to be worked out in order to get the PUEO loop in working order. Here's a list

• Skeletonize the xmacros (Alex)  04/10/23 In progress

  • This involves substituting some of the text to be variables that are replaced by the loop for each generation. 

  • Requires some slight modification of Part B1 in the loop.

• We need to modify PUEOsim to read in different gain files (Dylan) Changes made 04/10/23  Testing to be done.

  • Currently, PUEOsim reads in files like vv_0, vh_el, etc. It needs to be modified to take in the gainfiles as arguments and read different ones for each individual.

  • Requiers slight modification of the batch job scripts, but these are relatively small

• Slight modification on the fitness score read in script (Dylan)  Changes made 04/10/23  Testing to be done.

  • Now that PUEOsim is working and has been modified to output txt files with the effective volume, we just need to slightly amend the the fitness score script to read from those files.

• Fix Ezio's comments on XFintoPUEO.py and modify to read in outputs from two files (Jacob) 04/10/23 in progress, further work this week

  • Since we are running XF twice (once for each power source), we need the conversion script to read in from two files and print out to 8 files (vv_0, vh_el, etc)