| Alex M. |
Continued the run testing the XF fixes with Alex P. We think our fixes are working, but we want to get a few more generations through. We checked the uan files and saw different data, which we didn't see on the past runs, so this indicates the fix is working. Alex and I also showed Ryan and Evelyn more of the loop and how to interpret the plots being generated. I also put in the red-green color plots, but we need to get through the next generation to see if they work.
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I'm going to try to get through more generations tonight so we can see what other fixes we still need to implement. I'll continue looking at any bugs that arise tomorrow, but we're getting very close to being able to mergre branches.
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| Alex P. |
Picked up Ryan and Alex's run from yesterday to progress to the end of gen 1. Found an error related to the changes and moving UAN files after gen 0 with proper naming. After error was fixed went back to run and made sure the graphs all worked. XFintoARA.py had to be altered to fit the new changes. We saw that the UAN files now differed between individuals across generations whereas they hadn't before. Worked with Alex M and showed Evelyn and Ryan more about the loop and the graphs while also debugging our problems while sharing with them so they can see the process when running the loop and running into an error. |
Continue to run, hoping to iron out all errors so it can run on its own. Along with that making sure all the graph tools work, currently have an error in the Red/Green penalized version and also in the automatic upload of some graphs. Also hope to continue the old database run past generation 9 before implementing these changes on the database version. |
| Eliot |
Font Continued to work on erros within roulette algorithm. Met with Julie to discuss the issue we were still having. Soon after meeting, Leo and I got it to a near perfect state. There are only a couple genese that were unique that shouldn't have been. This is likely a small error that I will look into tomorrow.
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I plan to finalize the roulette alg to accept 2 chromosomes with 3 genes a piece. These will have shared radius and theta but unique lengths.
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